Update PyTorch to 2.9.0+cu129 (#24994)

Co-authored-by: Luka Govedič <ProExpertProg@users.noreply.github.com>

docker/Dockerfile

@@ -5,7 +5,7 @@
 # docs/contributing/dockerfile/dockerfile.md and
 # docs/assets/contributing/dockerfile-stages-dependency.png
 
-ARG CUDA_VERSION=12.8.1
+ARG CUDA_VERSION=12.9.1
 ARG PYTHON_VERSION=3.12
 
 # By parameterizing the base images, we allow third-party to use their own
@@ -275,6 +275,7 @@ WORKDIR /vllm-workspace
 ENV DEBIAN_FRONTEND=noninteractive
 ARG TARGETPLATFORM
 
+# TODO (huydhn): There is no prebuilt gdrcopy package on 12.9 at the moment
 ARG GDRCOPY_CUDA_VERSION=12.8
 # Keep in line with FINAL_BASE_IMAGE
 ARG GDRCOPY_OS_VERSION=Ubuntu22_04
@@ -360,6 +361,13 @@ RUN --mount=type=bind,from=build,src=/workspace/dist,target=/vllm-workspace/dist
     && uv pip install --system dist/*.whl --verbose \
         --extra-index-url ${PYTORCH_CUDA_INDEX_BASE_URL}/cu$(echo $CUDA_VERSION | cut -d. -f1,2 | tr -d '.')
 
+# TODO (huydhn): Remove this once xformers is released for 2.9.0
+RUN --mount=type=cache,target=/root/.cache/uv bash - <<'BASH'
+    . /etc/environment
+    export TORCH_CUDA_ARCH_LIST='7.5 8.0+PTX 9.0a'
+    uv pip install --system --no-build-isolation "git+https://github.com/facebookresearch/xformers@v0.0.32.post2"
+BASH
+
 # Install FlashInfer pre-compiled kernel cache and binaries
 # https://docs.flashinfer.ai/installation.html
 RUN --mount=type=cache,target=/root/.cache/uv \
@@ -426,6 +434,7 @@ ARG PYTHON_VERSION
 
 ARG PIP_INDEX_URL UV_INDEX_URL
 ARG PIP_EXTRA_INDEX_URL UV_EXTRA_INDEX_URL
+ARG PYTORCH_CUDA_INDEX_BASE_URL
 
 # This timeout (in seconds) is necessary when installing some dependencies via uv since it's likely to time out
 # Reference: https://github.com/astral-sh/uv/pull/1694
@@ -438,7 +447,8 @@ ENV UV_LINK_MODE=copy
 RUN --mount=type=cache,target=/root/.cache/uv \
     CUDA_MAJOR="${CUDA_VERSION%%.*}"; \
     if [ "$CUDA_MAJOR" -ge 12 ]; then \
-        uv pip install --system -r requirements/dev.txt; \
+        uv pip install --system -r requirements/dev.txt \
+        --extra-index-url ${PYTORCH_CUDA_INDEX_BASE_URL}/cu$(echo $CUDA_VERSION | cut -d. -f1,2 | tr -d '.'); \
     fi
 
 # install development dependencies (for testing)

docker/Dockerfile.cpu

@@ -199,9 +199,13 @@ FROM base AS vllm-test-deps
 
 WORKDIR /workspace/vllm
 
+# TODO: Update to 2.9.0 when there is a new build for intel_extension_for_pytorch for that version
 RUN --mount=type=bind,src=requirements/test.in,target=requirements/test.in \
     cp requirements/test.in requirements/cpu-test.in && \
     sed -i '/mamba_ssm/d' requirements/cpu-test.in && \
+    sed -i 's/^torch==.*/torch==2.8.0/g' requirements/cpu-test.in && \
+    sed -i 's/torchaudio.*/torchaudio/g' requirements/cpu-test.in && \
+    sed -i 's/torchvision.*/torchvision/g' requirements/cpu-test.in && \
     uv pip compile requirements/cpu-test.in -o requirements/cpu-test.txt --index-strategy unsafe-best-match --torch-backend cpu
 
 RUN --mount=type=cache,target=/root/.cache/uv \